Return to main results Retrieve Phyre Job Id

Job DescriptionQ45FX5
Confidence99.47%DateFri May 3 21:26:37 BST 2013
Rank146Aligned Residues56
% Identity25%Templatec2js0A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:cytoplasmic protein nck1; PDBTitle: solution structure of second sh3 domain of adaptor nck
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   934.....940.........950.........960.........970.........980.........990.
Predicted Secondary structure 































Query SS confidence 

























































Query Sequence  VHDYDAPSPNNEGKFLSFKTGDIVVLLDTVGEDRGWWKGQVNNKSGFFPLSYVKPYDP
Query Conservation 

   
 
  
  




 




 



   




 

  
  
 

 


 
   
Alig confidence 





























..

























Template Conservation   
 
 
 
      


   

 
 
    ..   
      
  
  
  

    
Template Sequence  PAYVKFNYMAEREDELSLIKGTKVIVMEKC. . SDGWWRGSYNGQVGWFPSNYVTEEGD
Template Known Secondary structure 
S
B


STTB

B
TT

..SSSTTGGGSS

Template Predicted Secondary structure 













..








Template SS confidence 

























































   6...10.........20.........30..... ....40.........50.........60.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D