 |
| Job Description | Q45FX5 | | Confidence | 99.42% | Date | Fri May 3 21:26:37 BST 2013 |
| Rank | 192 | Aligned Residues | 63 |
| % Identity | 24% | Template | c1u3oA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:huntingtin-associated protein-interacting |
PDBTitle: solution structure of rat kalirin n-terminal sh3 domain
|
| Resolution | UNK |
|
 |
|   |   |
925 | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | |
|
|
|
. | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | . |
| Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Y | S | Q | C | K | V | F | K | A | V | H | D | Y | D | A | P | S | P | N | N | E | G | K | F | L | S | F | K | T | G | D | I | V | V | L | L | D | T | V | G | E | D | R | G | W | W | K | G | Q | . |
. |
. |
. |
V | N | N | K | S | G | F | F | P | L | S | Y | V | K | P | Y | D | P |
| Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |
|
|
|
|
|   |
|
| . | . | . | . |   |   |
|   |   |
|   |
|
|   |
|
|
|   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |   |   |   |
|
|
|
|
|   |
| . | . | . | . |   |   |   |   |
|
|
|   |   |   |
|
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |
|
| Template Sequence |   |
S | G | G | C | E | L | T | V | V | L | Q | D | F | S | A | . |
. |
. |
. |
A | H | S | S | E | L | S | I | Q | V | G | Q | T | V | E | L | L | E | R | P | S | E | R | P | G | W | C | L | V | R | T | T | E | R | S | P | P | Q | E | G | L | V | P | S | S | T | L | C | I | S | H | S |
| Template Known Secondary structure |   |
|
|
|
|  |  |  |  |
| S | S |
| B |
|
| . | . | . | . |
| S | T | T |
|
|
| B |
| T | T |
|  |  |  |  | S | S |
| T | T | S | S | T | T |  |  |  |  |  |  | S | S | S | S | S |
|  |  |  |  |  |  | G | G | G | S |
|
|
|
|
|
| Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|