Return to main results Retrieve Phyre Job Id

Job DescriptionQ45FX5
Confidence99.45%DateFri May 3 21:26:37 BST 2013
Rank165Aligned Residues56
% Identity23%Templatec1s1nA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:nephrocystin 1; PDBTitle: sh3 domain of human nephrocystin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   934.....940.........950.........960.........970.... .....980.........990.
Predicted Secondary structure 






















.








Query SS confidence 








































.
















Query Sequence  VHDYDAPSPNNEGKFLSFKTGDIVVLLDTVGEDRGWWKGQV. NNKSGFFPLSYVKPYDP
Query Conservation 

   
 
  
  




 




 



   




 

 . 
  
 

 


 
   
Alig confidence 





























..








.
















Template Conservation     

 

      


   

 
 

   ..   

         
  
  

    
Template Sequence  EYIAVGDFTAQQVGDLTFKKGEILLVIEKK. . PDGWWIAKDAKGNEGLVPRTYLEPYSE
Template Known Secondary structure 
S
B

SSSS


B
SS
S

..SSS
SSS
STT


Template Predicted Secondary structure 











..













Template SS confidence 


























































   156...160.........170.........180..... ....190.........200.........210..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D