Job Description Q45FX5 Confidence 100.00% Date Fri May 3 21:26:37 BST 2013 Rank 24 Aligned Residues 295 % Identity 24% Template c1ntyA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:triple functional domain protein; PDBTitle: crystal structure of the first dh/ph domain of trio to 1.7 a Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.							.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		K	R	N	R	C	I	R	E	L	Y	D	T	E	K	N	Y	V	A	Q	A	L	V	T	I	I	K	T	F	Y	E	P	L	K	G	.	.	.	.	.	.	I	I	P	T	S	D	Y	N	I	I	F	G	N	I	E	E	I	N	V	L	H	T	A	L	L	A	D	L	E	Y	P	V	K	V	A	L	G	L	S	D
Query Conservation																																				.	.	.	.	.	.
Alig confidence																					.															.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation																					.																																																					.	.	.	.	.	.	.	.
Template Sequence		R	K	E	F	I	M	A	E	L	I	Q	T	E	K	A	Y	V	R	D	.	L	R	E	C	M	D	T	Y	L	W	E	M	T	S	G	V	E	E	I	P	P	G	I	V	N	K	E	L	I	I	F	G	N	M	Q	E	I	Y	E	F	H	N	N	I	F	L	K	E	L	E	K	Y	.	.	.	.	.	.	.	.
Template Known Secondary structure																					.																	S				T	T	T	T	T							T	T											T								T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		1233	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.		.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	P	R	P	I	S	L	N	E	C	V	P	Q	T	I	G	E	V	F	I	K	Y	R	D	Q	F	L	A	Y	G	K	Y	C	S	N	L	P	D	S	R	K	L	S	N	E	L	L	K	T	N	E	F	I	S	R	N	I	N	E	L	T	A	Q	G	N	C	K	F	G	M	N	D	L	L	C	V	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	E	Q	L	P	E	D	V	G	H	C	F	V	T	W	A	D	K	F	Q	M	Y	V	T	Y	C	K	N	K	P	D	S	T	Q	L	I	L	E	H	A	G	S	.	.	.	.	.	.	Y	F	D	E	I	Q	Q	R	H	G	L	A	N	S	I	S	S	Y	L	I	K	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T	T		G	G	G	T							T	T	T	T	T																					T	T	T	.	.	.	.	.	.										T		S	S							T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.
Template SS confidence
												1304	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.							.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	L	T	K	Y	P	L	L	L	K	E	L	Q	K	K	T	D	L	A	S	P	D	R	K	S	L	E	E	A	V	E	V	M	E	D	V	C	N	Y	I	N	E	E	S	R	D	T	N	A	I	K	V	I	D	E	I	E	Q	S	I	T	D	L	S	M	P	L	N	V	K	L	H	D	Y	G	R	V	N	L
Query Conservation
Alig confidence																									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	T	K	Y	Q	L	L	L	K	E	L	L	T	C	C	E	E	G	K	G	E	.	.	.	I	K	D	G	L	E	V	M	L	S	V	P	K	R	A	N	D	A	M	H	L	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	G	F	D	E	N	I	E	S	Q	G	E	L	I	L
Template Known Secondary structure																	T	S		T	T		T	T	.	.	.																						T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S			S		S	G	G	G
Template Predicted Secondary structure																									.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1368	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390				.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.																.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	E	V	K	M	A	E	S	T	L	T	Q	A	G	K	P	K	Q	R	Y	I	F	L	F	D	K	V	I	V	V	C	K	A	A	N	K	V	M	A	A	K	T	T	G	A	S	A	R	T	N	T	F	T	Y	K	N	A	Y	V	M	S	E	L	T	I	D	K	N	A	S	L	D	V	K	S	G	G	T	I
Query Conservation
Alig confidence													.																																.	.	.	.	.	.	.	.	.
Template Conservation													.																																.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	S	F	Q	V	W	D	P	K	T	.	L	I	R	K	G	R	E	R	H	L	F	L	F	E	M	S	L	V	F	S	K	E	V	K	D	S	S	G	R	S	K	.	.	.	.	.	.	.	.	.	Y	L	Y	K	S	K	L	F	T	S	E	L	G	V	T	E	H	V	E	G	D	P	C	K	F	A	L	W
Template Known Secondary structure										S	S	S	.	S	S												S	S											T	T					.	.	.	.	.	.	.	.	.									G	G	G								T	T		T	T
Template Predicted Secondary structure													.																																.	.	.	.	.	.	.	.	.
Template SS confidence
		1430	.	.	.	.	.	.	.	.	.	1440		.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.										.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	T	Q	Y	V	I	I	M	T	R	D	R	N	E	N	N	E	I	T	Q	L	T	F	Y	F	K	N	E	A	T	R	N	N	W	M	T	A	L	L	L	S	K	S	N
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	.	.	.	.	.	.	.	.	.	.	.	.	R	T	P	T	S	D	N	K	I	V	L	K	A	S	S	I	E	N	K	Q	D	W	I	K	H	I	R	E	V	I	Q	E
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.	.	.	.	S	S			T	T	T							S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1500	.													.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D