Job Description Q45FX5 Confidence 99.82% Date Fri May 3 21:26:37 BST 2013 Rank 53 Aligned Residues 200 % Identity 14% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	R	S	L	S	G	P	H	G	S	R	S	S	R	N	S	S	S	S	T	I	N	G	S	M	D	S	V	P	R	Q	Q	D	Y	V	N	T	E	I	S	E	F	L	W	Y	M	G	E	M	E	R	A	K	A	E	S	T	L	K	G	T	P	N	G	T	F	L	V	R	Y	S	K	N	R	K	Q	T	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E
Template Known Secondary structure																																				S										S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		867	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	Y	K	N	D	V	K	H	M	I	I	E	Q	N	S	D	G	K	V	Y	L	D	E	D	Y	I	F	N	S	T	V	E	L	V	Q	Y	Y	R	S	N	N	L	I	E	I	F	A	A	L	D	T	C	L	K	N	P	Y	S	Q	C	K	V	F	K	A	V	H	D	Y	D	A	P	S	P	N	N	E	G
Query Conservation
Alig confidence																																																																											.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	.	.	.	.	T	D	T
Template Known Secondary structure								S	S																																															S	S			T	T								S	S		B			.	.	.	.		S	T
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.					.	.	.
		947	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.				.	.	.	.	.	.	970	.	.											.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990
Predicted Secondary structure																			.	.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		K	F	L	S	F	K	T	G	D	I	V	V	L	L	D	T	V	.	.	.	G	E	D	R	G	W	W	K	G	.	.	.	.	.	.	.	.	.	.	Q	V	N	N	K	S	G	F	F	P	L	S	Y	V	K	P	Y	D
Query Conservation																			.	.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V	P
Template Known Secondary structure		T				B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D