Return to main results Retrieve Phyre Job Id

Job DescriptionQ45FX5
Confidence99.91%DateFri May 3 21:26:37 BST 2013
Rank41Aligned Residues207
% Identity27%Templatec1griA_
PDB info PDB header:signal transduction adaptorChain: A: PDB Molecule:growth factor bound protein 2; PDBTitle: grb2
Resolution3.10 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   692.......700.........710.........720.........730.........740.........750.........760.........770.
Predicted Secondary structure 











































































Query SS confidence 















































































Query Sequence  IVVANSNSTPSDLSYLQFAKGDRIEVIKMQGHNRFTGCLINNRNRTGLVHLDHVSQSRTTSMIGLSPIDSPAGSIAPRVV
Query Conservation     
           

  


 
 

   
  
 

     
   
  
   
           
    
         
Alig confidence 

























.....








...




































Template Conservation    





      



  

 
 
.....  
  
   ...   
  
   
                          
Template Sequence  EAIAKYDFKATADDELSFKRGDILKV. . . . . QNWYKAELN. . . GKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRH
Template Known Secondary structure 
S
B


SSS


B
TT

.....

SS...S
GGG



SSB
TT

T
SS
Template Predicted Secondary structure 

















.....


...






























Template SS confidence 















































































   2.......10.........20....... ..30...... ...40.........50.........60.........70...
 
   772.......780.........790.........800.........810.........820.........830.........840.........850.
Predicted Secondary structure 















































































Query SS confidence 















































































Query Sequence  RNESTVLPNKLLSDGSSRSLSGPHGSRSSRNSSSSTINGSMDSVPRQQDYVNTEISEFLWYMGEMERAKAESTLKGTPNG
Query Conservation            
 
                             
                   
   
      
     
Alig confidence 
.............................................................................

Template Conservation   .............................................................................  
Template Sequence  D. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GA
Template Known Secondary structure  T.............................................................................T
Template Predicted Secondary structure 
.............................................................................

Template SS confidence 















































































   80 ..
 
   852.......860.........870.........880.........890.........900.........910.........920.........930.
Predicted Secondary structure 













































































Query SS confidence 















































































Query Sequence  TFLVRYSKNRKQTAISLSYKNDVKHMIIEQNSDGKVYLDEDYIFNSTVELVQYYRSNNLIEIFAALDTCLKNPYSQCKVF
Query Conservation 
 


 

       
                             
                                  
Alig confidence 









































.




































Template Conservation                 
      
                   .  
                                  
Template Sequence  FLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVK. FNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYV
Template Known Secondary structure 
SSSTT
TT
SSS
SSS
.SSS
SSSSTT



B








Template Predicted Secondary structure 































.


































Template SS confidence 















































































   83......90.........100.........110.........120.... .....130.........140.........150.........160.
 
   932.......940.........950.........960.........970.........980.........990
Predicted Secondary structure 






























Query SS confidence 


























































Query Sequence  KAVHDYDAPSPNNEGKFLSFKTGDIVVLLDTVGEDRGWWKGQVNNKSGFFPLSYVKPYD
Query Conservation   


   
 
  
  




 




 



   




 

  
  
 

 


 
  
Alig confidence 







....



















..
























Template Conservation   


 
 
....    



  

 
 

 
 ..  


 
   
  
 





  
 
Template Sequence  QALFDFDP. . . . QEDGELGFRRGDFIHVMDNS. . DPNWWKGACHGQTGMFPRNYVTPVN
Template Known Secondary structure  SS



....SSTTB



TT


..SSS
SS
GGG
Template Predicted Secondary structure 




....








..








Template SS confidence 


























































   162....... 170.........180......... 190.........200.........210....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D