Job Description Q21408 Confidence 98.89% Date Sat Apr 13 12:50:02 BST 2013 Rank 81 Aligned Residues 138 % Identity 25% Template c3ox6C_ PDB info PDB header:calcium binding protein Chain: C: PDB Molecule:calcium-binding protein 1; PDBTitle: crystal structure of the calcium sensor calcium-binding protein 12 (cabp1) Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2277	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	S	E	E	A	L	R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A	F	M	I	S
Query Conservation
Alig confidence																																													.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		R	S	L	R	P	E	E	I	E	E	L	R	E	A	F	R	E	F	D	K	D	K	D	G	Y	I	N	C	R	D	L	G	N	C	M	R	T	M	G	Y	M	P	T	.	.	.	.	.	.	.	E	M	E	L	I	E	L	S	Q	Q	I	N	M	N	L	G	G	H	V	D	F	D	D	F	V	E	L	M	G	P
Template Known Secondary structure		S																						S	S	S													T	T					.	.	.	.	.	.	.													T	T	S	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		2357	.	.	2360	.	.				.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.									2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.
Predicted Secondary structure								.	.	.																												.	.	.	.	.	.	.	.
Query SS confidence								.	.	.																												.	.	.	.	.	.	.	.
Query Sequence		K	E	T	E	N	I	.	.	.	Q	S	S	E	E	I	E	M	A	F	R	A	L	S	K	E	F	R	P	Y	V	T	A	E	E	L	Y	.	.	.	.	.	.	.	.	A	N	L	T	P	E	Q	A	E	F	C	I	R	R	M	K	P	Y	M	D	A	I	S	G	R	S	I	Q	G	G	L	D	Y	E	Q	F
Query Conservation								.	.	.																												.	.	.	.	.	.	.	.
Alig confidence								.	.	.																												.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.
Template Sequence		K	L	L	A	E	T	A	D	M	I	G	V	K	E	L	R	D	A	F	R	E	F	D	T	N	G	D	G	E	I	S	T	S	E	L	R	E	A	M	R	A	L	L	G	H	Q	V	G	H	R	D	I	E	E	I	I	R	D	V	D	.	.	.	.	.	.	.	.	L	N	G	D	G	R	V	D	F	E	E	F
Template Known Secondary structure					T																				T	T		S	S	S	B														S	S																.	.	.	.	.	.	.	.	T	T	S	S	S	S	B
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.
		2426	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	M	M
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D