Job Description Q21408 Confidence 98.21% Date Sat Apr 13 12:50:02 BST 2013 Rank 230 Aligned Residues 64 % Identity 23% Template c3lcpC_ PDB info PDB header:protein binding Chain: C: PDB Molecule:multiple coagulation factor deficiency protein 2; PDBTitle: crystal structure of the carbohydrate recognition domain of lman1 in2 complex with mcfd2 Resolution 2.45 Å

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		2279	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.		.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		V	S	E	E	A	L	R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	.	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M
Query Conservation																																			.
Alig confidence											.	.																							.									.	.	.	.	.	.	.
Template Conservation											.	.																																.	.	.	.	.	.	.
Template Sequence		M	S	P	Q	E	L	Q	L	H	.	.	Y	F	K	M	H	D	Y	D	G	N	N	L	L	D	G	L	E	L	S	T	A	I	T	P	L	M	S	E	D	E	L	.	.	.	.	.	.	.	I	N	I	I	D	G	V	L	R	D	D	D	K	N	N	D	G	Y	I	D	Y	A	E	F	A
Template Known Secondary structure											.	.				T	T		T	T		S	S		B																			.	.	.	.	.	.	.													T	T		S	S		B
Template Predicted Secondary structure											.	.																																.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D