Return to main results Retrieve Phyre Job Id

Job DescriptionQ21408
Confidence99.42%DateSat Apr 13 12:50:02 BST 2013
Rank14Aligned Residues136
% Identity32%Templatec3ek7A_
PDB info PDB header:fluorescent proteinChain: A: PDB Molecule:myosin light chain kinase, green fluorescent protein, PDBTitle: calcium-saturated gcamp2 dimer
Resolution1.85 Å
Model Dimensions (Å)X: Y: Z:

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2278.2280.........2290.........2300.........2310.........2320.........2330.........2340.........2350.......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GVSEEALREFSMMFKHFDKEKTGRLDHQQFKSCLRALGYDLPMVDEGQPEPEFQRILDIVDPNRDGYVTLQEYMAFMISK
Query Conservation               
   
                                                              
Alig confidence 









































.......



























.

Template Conservation   

 


  
 
 
   
 
 

 

  

   
  
    
.......  

  
    
    
 
   

    .  
Template Sequence  NLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT. . . . . . . EAELQDMINEVDADGNGTIDFPEFLTMM. AR
Template Known Secondary structure 



TT
SS
TT



.......
TT
SSS.S
Template Predicted Secondary structure 













.......





.
Template SS confidence 















































































   302.......310.........320.........330.........340... ......350.........360.........370. ..
 
   2358.2360.........2370.........2380.........2390 .........2400.........2410.........2420.........
Predicted Secondary structure 














.......



















Query SS confidence 
































. . . . . . .






































Query Sequence  ETENIQSSEEIEMAFRALSKEFRPYVTAEELYA. . . . . . . NLTPEQAEFCIRRMKPYMDAISGRSIQGGLDYEQFVHAL
Query Conservation                                   .......                                       
Alig confidence 
































.......














........















Template Conservation          
 
  

   
 
  
 

  

   
   
  
   

  
    
........ 
 

 

  

   
Template Sequence  KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD. . . . . . . . IDGDGQVNYEEFVQMM
Template Known Secondary structure 



TT
SS
T




........SSSSSS
Template Predicted Secondary structure 



















........







Template SS confidence 














































































   378.380.........390.........400.........410.........420.........430.. .......440........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D