Job Description Q21408 Confidence 98.66% Date Sat Apr 13 12:50:02 BST 2013 Rank 139 Aligned Residues 129 % Identity 17% Template c3dd4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:kv channel-interacting protein 4; PDBTitle: structural basis of kchip4a modulation of kv4.3 slow inactivation Resolution 3.00 Å

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		2285	.	.	.	.	2290	.	.	.	.	.	.	.		.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		R	E	F	S	M	M	F	K	H	F	D	K	E	.	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A	F	M	I	S	K	E	T	E	N	I	Q
Query Conservation															.
Alig confidence															.																							.	.	.	.	.	.																														.	.
Template Conservation																																						.	.	.	.	.	.																														.	.
Template Sequence		K	E	L	Q	I	L	Y	R	G	F	K	N	E	C	P	S	G	V	V	N	E	E	T	F	K	E	I	Y	S	Q	F	F	P	Q	G	D	.	.	.	.	.	.	S	T	T	Y	A	H	F	L	F	N	A	F	D	T	D	H	N	G	A	V	S	F	E	D	F	I	K	G	L	.	.	S	I	L	L	R	G	T
Template Known Secondary structure													T	T			S																S		S	S	S	.	.	.	.	.	.											T	T		S	S			S	S											.	.						S
Template Predicted Secondary structure																																						.	.	.	.	.	.																														.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.							100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.
		2364	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390	.	.									.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence		S	S	E	E	I	E	M	A	F	R	A	L	S	K	E	F	R	P	Y	V	T	A	E	E	L	Y	A	N	L	.	.	.	.	.	.	.	.	T	P	E	Q	A	E	F	C	I	R	R	M	K	P	Y	M	D	A	I	S	G	R	S	I	Q	G	G	L	D	Y	E	Q	F	V	H	A	L
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.
Template Sequence		V	Q	E	K	L	N	W	A	F	N	L	Y	D	I	N	K	D	G	Y	I	T	K	E	E	M	L	D	I	M	K	A	I	Y	D	M	M	G	P	R	Q	H	V	E	T	F	F	Q	K	M	D	.	.	.	.	.	.	.	.	K	N	K	D	G	V	V	T	I	D	E	F	I	E	S	C
Template Known Secondary structure															T	T		S	S			B																			T											.	.	.	.	.	.	.	.	S	S		S	S	B
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.									.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D