Job Description Q21408 Confidence 74.93% Date Sat Apr 13 12:50:02 BST 2013 Rank 279 Aligned Residues 102 % Identity 25% Template c2zmeB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:vacuolar protein-sorting-associated protein 36; PDBTitle: integrated structural and functional model of the human escrt-ii2 complex Resolution 2.90 Å

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		2281	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.				.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.										.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		E	E	A	L	R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	.	.	.	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	.	.	.	.	.	.	.	.	.	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q
Query Conservation																												.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	E	M	V	E	L	S	K	S	I	A	N	K	I	K	D	K	Q	G	D	I	T	E	D	E	T	I	R	F	K	S	Y	L	L	S	M	G	I	A	N	P	V	T	R	E	T	Y	G	S	G	T	Q	Y	H	M	Q	L	A	K	Q	L	A	G	I	L	Q	V	P	L	E	E	R	G	G	I	M	S	L	T
Template Known Secondary structure															S								S			S												T	T					S	S		S	T	T			S																					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		2349	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Y	M	A	F	M	I	S	K	E	T	E	N	I	Q	S	S	E	E	I	E	M	A	F	R	A	L	S	K	E	F	R	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	Y	C	L	V	N	R	A	R	G	M	E	L	L	S	P	E	D	L	V	N	A	C	K	M	L	E	A	L	K	L	P	L
Template Known Secondary structure												S	S	S													T	T	G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D