Job Description Q21408 Confidence 67.64% Date Sat Apr 13 12:50:02 BST 2013 Rank 286 Aligned Residues 159 % Identity 13% Template c2p22C_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protein srn2; PDBTitle: structure of the yeast escrt-i heterotetramer core Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																				.	.					.	.	.	.	.	.	.
Query SS confidence																																				.	.					.	.	.	.	.	.	.
Query Sequence		N	D	T	H	A	P	P	E	P	V	L	E	V	P	P	P	Q	E	I	R	I	L	E	T	A	D	D	I	H	Q	R	R	Q	E	.	.	V	L	G	H	.	.	.	.	.	.	.	Y	S	I	F	K	D	H	S	Q	T	K	R	D	R	L	E	E	A	R	Q	F	Q	Y	F	K	R	D	A	D	E	L	N	V
Query Conservation																																				.	.					.	.	.	.	.	.	.
Alig confidence																																				.	.					.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	P	S	P	G	L	P	S	K	N	I	P	L	P	E	G	I	N	L	L	S	S	K	E	I	I	D	L	I	Q	T	H	R	H	Q	L	E	L	Y	V	T	K	F	N	P	L	T	D	F	A	G	K	I	H	A	F	R	D	Q	F	K	Q	L	E	E	N	F	E	D	L	H	E	Q	K	D	K	V	Q
Template Known Secondary structure				S													S	S	G	G	G	S		T	T																		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	L	E	K	L	Q	T	A	Q	E	E	N	F	R	D	P	S	N	L	Q	A	K	I	Q	K	H	E	A	F	E	A	E	V	Q	A	H	A	K	T	I	A	N	L	D	K	T	G	N	A	M	I	Q	H	N	H	F	A	S	E	H	I	K	K	R	L	E	E	L	H	A	L	W	D	K	L	F	F	K	L
Query Conservation
Alig confidence																																																																	.	.
Template Conservation																																																																	.	.
Template Sequence		A	L	L	E	N	A	R	I	L	E	S	K	Y	V	A	S	W	Q	D	Y	H	S	E	F	S	K	K	Y	G	D	I	A	L	K	K	K	L	E	Q	N	T	K	K	L	D	E	E	S	S	Q	L	E	T	T	T	R	S	I	D	S	A	D	D	.	.	L	D	Q	F	I	K	N	Y	L	D	I	R	T	Q	Y
Template Known Secondary structure																												T	S	S																									S		S								.	.
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	K	G	I	K	L	Q	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	L	R	R	E	K	L	A	T	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D