Job Description Q21408 Confidence 99.26% Date Sat Apr 13 12:50:02 BST 2013 Rank 23 Aligned Residues 211 % Identity 14% Template c2odvA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:plectin 1; PDBTitle: crystal structure of a fragment of the plakin domain of plectin, cys2 to ala mutant. Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010			.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		N	S	A	Y	L	Q	F	M	W	K	C	D	V	V	E	S	W	I	A	E	K	E	Q	Q	V	R	S	E	D	F	G	R	D	L	S	S	V	Q	I	L	L	T	K	Q	E	A	F	D	A	G	L	N	A	F	E	H	E	G	I	Q	R	I	T	E	L	K	D	Q	L	V	S	.	.	S	E	H	Q	Q	S	P
Query Conservation																																																																									.	.
Alig confidence																											.																																														.	.
Template Conservation																											.
Template Sequence		Q	L	R	W	Q	E	Y	R	E	L	V	L	L	L	L	Q	W	M	R	H	H	T	A	A	F	.	E	E	R	F	P	S	S	F	E	E	I	E	I	L	W	S	Q	F	L	K	F	K	E	M	E	L	P	A	K	E	A	D	K	N	R	S	K	G	I	Y	Q	S	L	E	G	A	V	Q	A	G	Q	L	K	V
Template Known Secondary structure																											.						S	S																		T																								T	T	S	S
Template Predicted Secondary structure																											.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
		2018	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	K	R	H	T	N	V	I	Q	R	W	Q	N	L	L	A	H	S	E	A	R	R	Q	K	L	L	K	M	Q	Q	Q	F	K	Q	I	E	E	L	Y	L	A	F	A	K	K	A	S	T	F	N	S	W	F	E	N	A	E	E	D	L	T	D	P	V	R	C	N	S	L	E	E	I	R	A	L	R	D	A
Query Conservation
Alig confidence																																																																				.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		P	P	G	Y	H	P	L	D	V	E	K	E	W	G	K	L	H	V	A	I	L	E	R	E	K	Q	L	R	S	E	F	E	R	L	E	A	L	Q	R	I	V	T	K	L	Q	M	E	A	G	L	A	E	E	Q	L	N	Q	A	D	A	L	L	Q	S	D	V	.	.	.	R	L	L	A	A	G	K	V	P	Q	R
Template Known Secondary structure			T	T		S																																																														.	.	.			T	T	T	T				S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450				.	.	.	.	.	.	.	.	.	460	.
		2098	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.	.	.	.	.	.	2150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	E	F	Q	R	S	L	S	S	A	E	E	D	F	R	Q	L	Q	D	L	D	R	R	I	K	S	F	N	V	G	P	N	P	Y	T	W	F	T	M	D	A	L	E	D	T	W	R	N	L	Q	R	I	I	K	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	E	V	E	R	D	L	D	K	A	D	S	M	I	R	L	L	F	N	D	V	Q	T	L	K	D	G	R	H	P	Q	G	E	Q	M	Y	R	R	V	Y	R	L	H	K	R	L	V	A	I	R	T	E	Y	N	L	R
Template Known Secondary structure																													T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D