Job Description Q21408 Confidence 26.66% Date Sat Apr 13 12:50:02 BST 2013 Rank 355 Aligned Residues 61 % Identity 18% Template c2o59B_ PDB info PDB header:isomerase/dna Chain: B: PDB Molecule:dna topoisomerase 3; PDBTitle: structure of e. coli topoisomerase iii in complex with an 8-2 base single stranded oligonucleotide. frozen in glycerol3 ph 8.0 Resolution 2.50 Å

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		2338	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.										.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.
Query Sequence		D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A	F	M	.	.	.	.	.	.	.	.	.	I	S	K	E	T	E	N	I	Q	S	S	E	E	I	E	M	A	F	R	A	L	S	K	E	F	R	P	Y	V	T	A	E	E	L	Y	A	N	L	T	P	E	Q	A	E	F	C	I
Query Conservation																			.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.																						.							.	.
Template Conservation																																																	.							.	.
Template Sequence		D	P	D	R	E	G	Q	L	L	V	D	E	V	L	D	Y	L	Q	L	A	P	E	K	R	Q	Q	V	Q	R	C	L	I	N	D	L	N	P	Q	A	V	E	R	A	I	D	R	L	.	R	S	N	S	E	F	.	.	V	P	L	C	V	S	A	L	A	R	A	R	A	D	W	L	Y
Template Known Secondary structure			S	S														T	T							T	T							S			S										S		.			G	G	G	G	.	.
Template Predicted Secondary structure																																																	.							.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D