Return to main results Retrieve Phyre Job Id

Job DescriptionQ21408
Confidence98.88%DateSat Apr 13 12:50:02 BST 2013
Rank87Aligned Residues137
% Identity26%Templatec2lhiA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:calmodulin, serine/threonine-protein phosphatase 2b PDBTitle: solution structure of ca2+/cna1 peptide-bound ycam
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2276...2280.........2290.........2300.........2310.........2320.........2330.........2340.........2350.....
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Query Sequence  QSGVSEEALREFSMMFKHFDKEKTGRLDHQQFKSCLRALGYDLPMVDEGQPEPEFQRILDIVDPNRDGYVTLQEYMAFMI
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Template Sequence  SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPS. . . . . . . EAEVNDLMNEIDVDGNHQIEFSEFLALM.
Template Known Secondary structure 




TTGGGTT
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B
T



.......TTT
SS
SSSB
TT.
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   1........10.........20.........30.........40.... .....50.........60.........70..
 
   2356...2360.........2370.........2380......... 2390.........2400.........2410.........2420........
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Query Sequence  SKETENIQSSEEIEMAFRALSKEFRPYVTAEELY. . . . . . . ANLTPEQAEFCIRRMKPYMDAISGRSIQGGLDYEQFVHA
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Template Sequence  SRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS. . . . . . . . . DGSGEINIQQFAAL
Template Known Secondary structure  TSS

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   73......80.........90.........100.........110.........120......... 130.........140...
 
   2429
Predicted Secondary structure 
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Query Sequence  L
Query Conservation   
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Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   144
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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