Job Description Q21408 Confidence 92.76% Date Sat Apr 13 12:50:02 BST 2013 Rank 267 Aligned Residues 89 % Identity 13% Template c2kavA_ PDB info PDB header:transport protein regulator Chain: A: PDB Molecule:sodium channel protein type 2 subunit alpha; PDBTitle: solution structure of the human voltage-gated sodium channel, brain2 isoform (nav1.2) Resolution UNK

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		2275	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.		.	.	.	.	.	.	2350	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		N	Q	S	G	V	S	E	E	A	L	R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	.	Y	V	T	L	Q	E	Y	M	A	F
Query Conservation																																																																							.
Alig confidence																																																.	.	.	.	.																			.
Template Conservation																																																.	.	.	.	.
Template Sequence		S	A	E	P	L	S	E	D	D	F	E	M	F	Y	E	V	W	E	K	F	D	P	D	A	T	Q	F	I	E	F	A	K	L	S	D	F	A	D	A	L	D	P	P	L	L	I	.	.	.	.	.	A	K	P	N	K	V	Q	L	I	A	M	D	L	P	M	V	S	G	D	R	I	H	C	L	D	I	L	F	A
Template Known Secondary structure			S		S	S																	T	T							G	G	G								S		T	T	S			.	.	.	.	.		T	T								T						T	T	T
Template Predicted Secondary structure																																																.	.	.	.	.
Template SS confidence
		1786	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.						.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860
		2354	.	.	.	.	.	2360	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	S	K	E	T	E	N	I	Q	S	S	E	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	K	R	V	L	G	E	S	G	E	M	D	A	L
Template Known Secondary structure						T	T	T	T	T	S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		1861	.	.	.	.	.	.	.	.	1870	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D