 |
| Job Description | Q21408 | | Confidence | 98.72% | Date | Sat Apr 13 12:50:02 BST 2013 |
| Rank | 119 | Aligned Residues | 64 |
| % Identity | 28% | Template | c2k7cA_ |
| PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:calcium-binding protein 1; |
PDBTitle: nmr structure of mg2+-bound cabp1 c-domain
|
| Resolution | UNK |
|
 |
|   |   |
2284 | . | . | . | . | . | 2290 | . | . | . | . | . | . | . | . | . | 2300 | . | . | . | . | . | . | . | . | . | 2310 | . | . | . | |
. | . | . | . | . | . | 2320 | . | . | . | . | . | . | . | . | . | 2330 | . | . | . | . | . | . | . | . | . | 2340 | . | . | . | . | . | . | . | . | . | 2350 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | R | E | F | S | M | M | F | K | H | F | D | K | E | K | T | G | R | L | D | H | Q | Q | F | K | S | C | L | R | A | . |
L | G | Y | D | L | P | M | V | D | E | G | Q | P | E | P | E | F | Q | R | I | L | D | I | V | D | P | N | R | D | G | Y | V | T | L | Q | E | Y | M | A | F | M |
| Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |   |   |
|   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |
|
|   |   |   |
|
| Template Sequence |   |
V | K | E | L | R | D | A | F | R | E | F | D | T | N | G | D | G | E | I | S | T | S | E | L | R | E | A | M | R | K | L | L | G | H | Q | V | G | . |
. |
. |
. |
. |
. |
. |
H | R | D | I | E | E | I | I | R | D | V | D | L | N | G | D | G | R | V | D | F | E | E | F | V | R | M | M |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
| S | S | S | S |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S | S | S |
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | S |
|
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|