Return to main results Retrieve Phyre Job Id

Job DescriptionQ21408
Confidence71.36%DateSat Apr 13 12:50:02 BST 2013
Rank281Aligned Residues86
% Identity17%Templatec2k60A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein (stromal interaction molecule 1); PDBTitle: nmr structure of calcium-loaded stim1 ef-sam
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2328.2330.........2340.........2350.........2360.........2370.........2380.........2390. ........
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Query Sequence  PEFQRILDIVDPNRDGYVTLQEYMAFMISKETENIQSSEEIEMAFRALSKEFRPYVTAEELYAN. . . . . . . . LTPEQAEF
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Template Sequence  EAVRNIHKLMDDDANGDVDVEESDEFL. . REDLNYHDPTVKHSTF. . . . HGEDKLISVEDLWKAWKSSEVYNWTVDEVVQ
Template Known Secondary structure  TT
TT
SS
TTTTTT..TTSS
T....TSSS

S

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   66...70.........80.........90.. .......100........ .110.........120.........130.........
 
   2400... ......2410.........
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Query Sequence  CIRR. . . MKPYMDAISGRSIQGG
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Template Sequence  WLITYVELPQYEETFRKLQLSGH
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TT

STT
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   140.........150.........160..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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