Job Description Q21408 Confidence 99.17% Date Sat Apr 13 12:50:02 BST 2013 Rank 26 Aligned Residues 180 % Identity 14% Template c2iakA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:bullous pemphigoid antigen 1, isoform 5; PDBTitle: crystal structure of a protease resistant fragment of the plakin2 domain of bullous pemphigoid antigen1 (bpag1) Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	L	H	F	I	R	Q	C	D	E	I	L	Y	W	I	R	E	K	E	T	Y	V	T	A	E	D	M	G	M	D	L	E	H	V	E	I	L	Q	R	K	F	D	D	F	L	K	E	L	G	N	H	Q	Y	R	I	N	E	I	N	Q	A	A	D	K	L	V	E	E	G	H	S	E	H	D	Q	I	Y	K	K
Query Conservation
Alig confidence																																																																				.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		E	E	E	V	N	M	K	F	V	Q	D	L	L	N	W	V	D	E	M	Q	V	Q	L	D	R	T	E	W	G	S	D	L	P	S	V	E	S	H	L	E	N	H	K	N	V	H	R	A	I	E	E	F	E	S	S	L	K	E	A	K	I	S	E	I	Q	M	.	.	.	T	A	P	L	K	L	S	Y	T	D	K
Template Known Secondary structure								.																		T					S	S																					T											G	G	G		.	.	.		T	T
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	D	V	N	D	A	W	H	R	L	N	T	L	A	A	T	R	K	E	G	L	F	G	A	H	Q	V	Q	R	F	N	R	D	A	D	E	T	L	A	W	I	G	E	K	D	L	A	L	S	S	D	D	Y	G	R	D	L	N	N	V	Q	A	L	Q	R	K	H	E	G	T	E	R	D	L	A	A	L	E	G
Query Conservation
Alig confidence																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	H	R	L	E	S	Q	Y	A	K	L	L	N	T	S	R	N	Q	E	R	H	L	D	.	.	.	T	L	H	N	F	V	T	R	A	T	N	E	L	I	W	L	N	E	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	E	V	A	Y	H	A	E	L	M	R	E	L	E	Q	K	E	E
Template Known Secondary structure												T	T	T											.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S
Template Predicted Secondary structure																									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	L	Q	L	E	K	E	A	H	K	L	A	E	T	H	P	D	R	A	E	A	I	H	Q	K	N	D	D	T	K	A	A	W	N	A	L	K	E	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	K	A	V	Q	E	I	A	E	Q	L	L	L	E	N	H	P	A	R	L	T	I	E	A	Y	R	A	A	M	Q	T	Q	W	S	W	I	L	Q	L	C
Template Known Secondary structure																T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D