Job Description Q21408 Confidence 98.79% Date Sat Apr 13 12:50:02 BST 2013 Rank 98 Aligned Residues 136 % Identity 12% Template c2hpkA_ PDB info PDB header:luminescent protein Chain: A: PDB Molecule:photoprotein berovin; PDBTitle: crystal structure of photoprotein berovin from beroe2 abyssicola Resolution 2.00 Å

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		2286	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.			.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	.	.	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A	F	M	I	S	K	E	T	E	N	I	Q
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		R	L	Y	K	R	F	D	T	F	D	L	D	S	D	G	K	X	E	X	D	E	V	L	Y	W	P	D	R	X	R	Q	L	V	N	A	T	D	E	Q	V	E	K	X	R	D	A	V	R	V	F	F	L	H	K	G	V	E	P	V	N	G	L	L	R	E	D	W	V	E	A	N	R	V	F	A	E	A	E	R	E
Template Known Secondary structure												T	T		S	S								T										S																					T	T		B	T	T	T	B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		2364	.	.	.										.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390	.						.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		S	S	E	E	.	.	.	.	.	.	.	.	.	I	E	M	A	F	R	A	L	S	K	E	F	R	P	Y	V	T	A	E	E	L	Y	A	N	.	.	.	.	.	L	T	P	E	Q	A	E	F	C	I	R	R	M	K	P	Y	M	D	A	I	S	G	R	S	I	Q	G	G	L	D	Y	E	Q	F	V	H	A	L
Query Conservation						.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																									.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		R	E	R	R	G	E	P	S	L	I	A	L	L	S	N	S	Y	Y	D	V	L	D	D	D	G	D	G	T	V	D	V	D	E	L	K	T	X	X	K	A	F	D	V	P	Q	E	A	A	Y	T	F	F	E	K	A	D	.	.	.	.	.	.	.	.	T	D	K	S	G	K	L	E	R	T	E	L	V	H	L	F
Template Known Secondary structure					T	T																		T	T		S	S	S	B												T	T	S		T	T											.	.	.	.	.	.	.	.	T	T			S	S	B
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D