Phyre 2 alignment of Q21408 with c2fcdA

Job Description Q21408
Confidence 98.80% Date Sat Apr 13 12:50:02 BST 2013

Rank 96 Aligned Residues 63

% Identity 24% Template c2fcdA_

PDB info PDB header:cell cycle Chain: A: PDB Molecule:myosin light chain 1; PDBTitle: solution structure of n-lobe myosin light chain from2 saccharomices cerevisiae

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2285	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.		.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence	R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	.	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A	F	M
Query Conservation																																																				.
Alig confidence																																				.	.	.	.	.	.	.										.
Template Conservation																																				.	.	.	.	.	.	.
Template Sequence	R	A	N	K	D	I	F	T	L	F	D	K	K	G	Q	G	A	I	A	K	D	S	L	G	D	Y	L	R	A	I	G	Y	N	P	T	.	.	.	.	.	.	.	N	Q	L	V	Q	D	I	I	N	A	D	S	S	L	R	D	A	S	S	L	T	L	D	Q	I	T	G	L	I
Template Known Secondary structure													S	S	S	S				G	G	G									T					.	.	.	.	.	.	.										T	S	T	T	T	S	S		S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.
Template SS confidence
	5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.								40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.

Download:

Text version

FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions

Phyre2 is part of Genome3D