Job Description Q21408 Confidence 98.72% Date Sat Apr 13 12:50:02 BST 2013 Rank 118 Aligned Residues 143 % Identity 18% Template c2f33A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calbindin; PDBTitle: nmr solution structure of ca2+-loaded calbindin d28k Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2285	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.								.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.
Query Sequence		R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A	F	M	.	.	.	.	.	.	.	I	S	K
Query Conservation																																																																								.	.	.	.	.	.	.
Alig confidence																																		.																																						.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		S	Q	F	F	E	I	W	L	H	F	D	A	D	G	S	G	Y	L	E	G	K	E	L	Q	N	L	I	Q	E	L	L	Q	.	A	R	K	K	A	G	L	E	L	S	P	E	M	K	T	F	V	D	Q	Y	G	Q	R	D	D	G	K	I	G	I	V	E	L	A	H	V	L	P	T	E	E	N	F	L	L	L	F
Template Known Secondary structure													T	T		S	S	S	B		S													.						T															T	T	G	G	G			B									T	T	S		T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		2358	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390	.												.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.	.	.	.	.	2420	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	E	N	I	Q	S	S	E	E	I	E	M	A	F	R	A	L	S	K	E	F	R	P	Y	V	T	A	E	E	L	Y	A	N	.	.	.	.	.	.	.	.	.	.	.	L	T	P	E	Q	A	E	F	C	I	R	R	M	K	P	Y	M	D	A	I	S	G	R	S	I	Q	G	G	L	D	Y	E	Q	F	V
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		R	C	Q	Q	L	K	S	C	E	E	F	M	K	T	W	R	K	Y	D	T	D	H	S	G	F	I	E	T	E	E	L	K	N	F	L	K	D	L	L	E	K	A	N	K	T	V	D	D	T	K	L	A	E	Y	T	D	L	M	L	K	L	F	D	S	N	N	D	.	.	.	.	G	K	L	E	L	T	E	M	A
Template Known Secondary structure		G	G	G	T	S	S										T	T	S	S	T	T	T		S	S	B																	T	S																		T		S	S	S	S	.	.	.	.	S		B
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.					160	.	.	.	.	.	.	.	.
		2427	.	.	2430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	F	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	L	P	V	Q
Template Known Secondary structure				S		T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D