Job Description Q21408 Confidence 98.29% Date Sat Apr 13 12:50:02 BST 2013 Rank 218 Aligned Residues 64 % Identity 17% Template c1wlzD_ PDB info PDB header:unknown function Chain: D: PDB Molecule:cap-binding protein complex interacting protein PDBTitle: crystal structure of djbp fragment which was obtained by2 limited proteolysis Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2282	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.	.	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	R	E	F	S	M	M	F	K	H	F	D	K	E	K	T	G	R	L	D	H	Q	Q	F	K	S	C	L	R	A	L	G	Y	D	L	P	M	V	D	E	G	Q	P	E	P	E	F	Q	R	I	L	D	I	V	D	P	N	R	D	G	Y	V	T	L	Q	E	Y	M	A
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		S	H	Y	H	A	I	T	Q	E	F	E	N	F	D	T	M	K	T	N	T	I	S	R	E	E	F	R	A	I	C	N	R	R	V	Q	I	L	T	.	.	.	.	.	.	.	D	E	Q	F	D	R	L	W	N	E	M	P	V	N	A	K	G	R	L	K	Y	P	D	F	L	S
Template Known Secondary structure			S													T	T			S															T					.	.	.	.	.	.	.									T	T	S		B		T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.								.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D