Job Description Q21408 Confidence 99.85% Date Sat Apr 13 12:50:02 BST 2013 Rank 4 Aligned Residues 313 % Identity 26% Template c1u4qB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spectrin alpha chain, brain; PDBTitle: crystal structure of repeats 15, 16 and 17 of chicken brain2 alpha spectrin Resolution 2.50 Å Model Dimensions (Å) X:40.564 Y:161.244 Z:35.503

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		Q	Y	F	K	R	D	A	D	E	L	N	V	W	I	L	E	K	L	Q	T	A	Q	E	E	N	F	R	.	D	P	S	N	L	Q	A	K	I	Q	K	H	E	A	F	E	A	E	V	Q	A	H	A	K	T	I	A	N	L	D	K	T	G	N	A	M	I	Q	H	N	H	F	A	S	E	H	I	K	K	R	L	E
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		Q	N	F	N	T	G	I	K	D	F	D	F	W	L	S	E	V	E	A	L	L	A	S	E	D	Y	G	K	D	L	A	S	V	N	N	L	L	K	K	H	Q	L	L	E	A	D	I	S	A	H	E	D	R	L	K	D	L	N	S	Q	A	D	S	L	M	T	S	S	A	F	D	T	S	Q	V	K	D	K	R	E
Template Known Secondary structure																						T	T						S	S																																					T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		1666	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	H	A	L	W	D	K	L	F	F	K	L	K	D	K	G	I	K	L	Q	Q	A	L	K	L	L	H	F	I	R	Q	C	D	E	I	L	Y	W	I	R	E	K	E	T	Y	V	T	A	E	D	M	G	M	D	L	E	H	V	E	I	L	Q	R	K	F	D	D	F	L	K	E	L	G	N	H	Q	Y	R	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	N	G	R	F	Q	R	I	K	S	M	A	A	A	R	R	A	K	L	N	E	S	H	R	L	H	Q	F	F	R	D	M	D	D	E	E	S	W	I	K	E	K	K	L	L	V	S	S	E	D	Y	G	R	D	L	T	G	V	Q	N	L	R	K	K	H	K	R	L	E	A	E	L	A	A	H	E	P	A	I
Template Known Secondary structure																																																T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		1746	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	I	N	Q	A	A	D	K	L	V	E	E	G	H	S	E	H	D	Q	I	Y	K	K	R	D	D	V	N	D	A	W	H	R	L	N	T	L	A	A	T	R	K	E	G	L	F	G	A	H	Q	V	Q	R	F	N	R	D	A	D	E	T	L	A	W	I	G	E	K	D	L	A	L	S	S	D	D	Y	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	V	L	D	T	G	K	K	L	S	D	D	N	T	I	G	K	E	E	I	Q	Q	R	L	A	Q	F	V	D	H	W	K	E	L	K	Q	L	A	A	A	R	G	Q	R	L	E	E	S	L	E	Y	Q	Q	F	V	A	N	V	E	E	E	E	A	W	I	N	E	K	M	T	L	V	A	S	E	D	Y	G	D
Template Known Secondary structure													T	T			S																																																									T	S						S
Template Predicted Secondary structure
Template SS confidence
		1826	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.	.	.	1890	.	.	.	.	.	.	.	.	.	1900	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	N	N	V	Q	A	L	Q	R	K	H	E	G	T	E	R	D	L	A	A	L	E	G	K	M	L	Q	L	E	K	E	A	H	K	L	A	E	T	H	P	D	R	A	E	A	I	H	Q	K	N	D	D	T	K	A	A	W	N	A	L	K	E	K	A	Q	H	R	K	D	G	L	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	A	A	I	Q	G	L	L	K	K	H	E	A	F	E	T	D	F	T	V	H	K	D	R	V	N	D	V	C	A	N	G	E	D	L	I	K	K	N	N	H	H	V	E	N	I	T	A	K	M	K	G	L	K	G	K	V	S	D	L	E	K	A	A	A	Q	R	K	A	K	L	D	E
Template Known Secondary structure		S																																						T	T		S	T					T
Template Predicted Secondary structure
Template SS confidence
		1906	.	.	.	1910	.	.	.	.	.	.	.	.	.	1920	.	.	.	.	.	.	.	.	.	1930	.	.	.	.	.	.	.	.	.	1940	.	.	.	.	.	.	.	.	.	1950	.	.	.	.	.	.	.	.	.	1960	.	.	.	.	.	.	.	.	.	1970	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D