 |
| Job Description | Q21408 | | Confidence | 98.26% | Date | Sat Apr 13 12:50:02 BST 2013 |
| Rank | 220 | Aligned Residues | 133 |
| % Identity | 16% | Template | c1eg4A_ |
| PDB info |
PDB header:structural protein | Chain: A: PDB Molecule:dystrophin; |
PDBTitle: structure of a dystrophin ww domain fragment in complex2 with a beta-dystroglycan peptide
|
| Resolution | 2.00 Å |
|
 |
|   |   |
2286 | . | . | . | 2290 | . | . | . | . | . | . | . | . | |
|
|
|
. | 2300 | . | . | . | . | . | . | . | . | . | 2310 | . | . | . | . | . | . | . | . | . | 2320 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 2330 | . | . | . | . | . | . | . | . | . | 2340 | . | . | . | . | . | . | . | . | . | 2350 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
E | F | S | M | M | F | K | H | F | D | K | E | K | . |
. |
. |
. |
T | G | R | L | D | H | Q | Q | F | K | S | C | L | R | A | L | G | Y | D | L | P | M | V | D | . |
. |
. |
. |
. |
. |
E | G | Q | P | E | P | E | F | Q | R | I | L | D | I | V | D | P | N | R | D | G | Y | V | T | L | Q | E | Y | M | A | F | M | I |
| Query Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| Template Conservation |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
| . |
| Template Sequence |   |
S | L | S | A | A | C | D | A | L | D | Q | H | N | L | K | Q | N | D | Q | P | M | D | I | L | Q | I | I | N | C | L | T | T | I | Y | D | R | L | E | Q | E | H | N | N | L | V | N | V | P | L | C | V | D | M | C | L | N | W | L | L | N | V | Y | D | T | G | R | T | G | R | I | R | V | L | S | F | K | T | G | I | . |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  | . |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | |
|   |
|   |   |
2356 | . | . | . | 2360 | . | . | . | . | . | . | . | . | . | 2370 | . | . | . | . | . | . | . | . | . | 2380 | . | . | . | . | . | . | . | . | . | 2390 | . | . | . | . | . | . | . | . | . | 2400 | . | . | . | . | . | . | . | . | . | 2410 | . | . | . | . | . | . | . | . | . | 2420 | . | . | . | . | . | . | . | . | . | 2430 |
| Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | K | E | T | E | N | I | Q | S | S | E | E | I | E | M | A | F | R | A | L | S | K | E | F | R | P | Y | V | T | A | E | E | L | Y | A | N | L | T | P | E | Q | A | E | F | C | I | R | R | M | K | P | Y | M | D | A | I | S | G | R | S | I | Q | G | G | L | D | Y | E | Q | F | V | H | A | L | F |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. |   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |
|   |
|   |
| . |
|   |   |
|   |
|   |   |   |
|
|   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|
| Template Sequence |   |
. |
I | S | L | C | K | A | H | L | E | D | K | Y | R | Y | L | F | K | Q | V | A | . |
S | S | T | G | F | C | D | Q | R | R | L | G | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | H | D | S | I | Q | I | P | R | Q | L | G | E | V | A | S | F | G | G | S | N | I | E | P | S | V | R | S | C | F |
| Template Known Secondary structure |   |
. |  |  | T | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | . |
| T | T | S |
| B |
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | G | T |
| S |
|
|  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
. |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
204 | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|