Phyre 2 alignment of Q21408 with c4f3nA_

Return to main results | Retrieve Phyre Job Id

Job Description | Q21408
Confidence | 47.47% | Date | Sat Apr 13 12:50:02 BST 2013
Rank | 302 | Aligned Residues | 47
% Identity | 26% | Template | c4f3nA_
PDB info | PDB header:unknown function | Chain: A: PDB Molecule:uncharacterized acr, cog1565 superfamily; | PDBTitle: high resolution native crystal structure of an uncharacterized acr,2 cog1565 superfamily protein from burkholderia thailandensis, solved3 by iodide ion sad
Resolution | 1.75 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2341 | . | . | . | . | . | . | . | . | 2350 | . | . | . | . | . | . | . | . | . | 2360 | . | . | . | . | . | . | . | . | . | 2370 | . | . | . | . | . | . | . | . | . | 2380 | . | . | . | . | . | . | . | . | . | 2390 | . | . | . | . | . | . | . | . | . | 2400 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | D | G | Y | V | T | L | Q | E | Y | M | A | F | M | I | S | K | E | T | E | N | I | Q | S | S | E | E | I | E | M | A | F | R | A | L | S | K | E | F | R | P | Y | V | T | A | E | E | L | Y | A | N | L | T | P | E | Q | A | E | F | C | I | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | G | G | W | I | P | F | S | R | Y | M | E | R | V | L | Y | A | P | G | M | G | Y | Y | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | G | D | F | V | T | A | P | E | L | S | P | L | F | A | Q | T | L | A | R | P | V | A | Q
Template Known Secondary structure |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T | T | S | S | S |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  | S | S |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions
| Phyre2 is part of Genome3D |