Phyre 2 alignment of Q21408 with c2pxgA_

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Job Description | Q21408
Confidence | 39.55% | Date | Sat Apr 13 12:50:02 BST 2013
Rank | 321 | Aligned Residues | 32
% Identity | 19% | Template | c2pxgA_
PDB info | PDB header:membrane protein | Chain: A: PDB Molecule:outer membrane protein; | PDBTitle: nmr solution structure of omla
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2386 | . | . | . | 2390 | . | . | . | . | . | . | . | . | . | 2400 | . | . | . | . | . | . | . | . | . | 2410 | . | . | . | . | . | . | . | . | . | 2420 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | E | L | Y | A | N | L | T | P | E | Q | A | E | F | C | I | R | R | M | K | P | Y | M | D | A | I | S | G | R | S | I | Q | G | G | L | D | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
Template Sequence |  | E | Q | L | Q | V | G | Q | S | K | Q | Q | V | S | A | L | L | G | T | . | P | S | I | P | D | P | F | H | A | . | . | . | . | Q | R | W | D | Y
Template Known Secondary structure |  | T | T | T |  |  |  | S |  |  |  |  |  |  |  |  |  | T | S | . |  |  |  |  |  | T | T | T |  | . | . | . | . |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . |  | . | . | . | . | . | . | . | . | 50 |  |  |  |  | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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