Phyre 2 alignment of Q21408 with c2kxxA_

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Job Description | Q21408
Confidence | 26.14% | Date | Sat Apr 13 12:50:02 BST 2013
Rank | 360 | Aligned Residues | 33
% Identity | 12% | Template | c2kxxA_
PDB info | PDB header:protein binding | Chain: A: PDB Molecule:small protein a; | PDBTitle: nmr structure of escherichia coli bame, a lipoprotein component of the2 beta-barrel assembly machinery complex
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2385 | . | . | . | . | 2390 | . | . | . | . | . | . | . | . | . | 2400 | . | . | . | . | . | . | . | . | . | 2410 | . | . | . | . | . | . | . | . | . | 2420 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | E | E | L | Y | A | N | L | T | P | E | Q | A | E | F | C | I | R | R | M | K | P | Y | M | D | A | I | S | G | R | S | I | Q | G | G | L | D | Y
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
Template Sequence |  | V | S | K | I | R | V | G | M | T | Q | Q | Q | V | A | Y | A | L | G | T | . | P | L | M | S | D | P | F | G | T | . | . | . | . | N | T | W | F | Y
Template Known Secondary structure |  |  |  |  |  |  | T | T | S | B |  |  |  |  |  |  |  |  |  |  | . |  | T | T | S |  | G | G | G |  | . | . | . | . | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . |  | . | . | . | . | . | . | . | . | 70 |  |  |  |  | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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