Phyre 2 alignment of Q21408 with c3l9qB_

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Job Description | Q21408
Confidence | 23.35% | Date | Sat Apr 13 12:50:02 BST 2013
Rank | 378 | Aligned Residues | 34
% Identity | 29% | Template | c3l9qB_
PDB info | PDB header:transferase | Chain: B: PDB Molecule:dna primase large subunit; | PDBTitle: crystal structure of human polymerase alpha-primase p58 iron-sulfur2 cluster domain
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2291 | . | . | . | . | . | . | . | . | 2300 | . | . | . | . | . | . | . | . | . | 2310 | . | . | . | . | . | . | . | . | . | 2320 | . | . | . | . | . | . | . | . | . | 2330 | . | . | . | . | . | . | . | . | . | 2340 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | K | H | F | D | K | E | K | T | G | R | L | D | H | Q | Q | F | K | S | C | L | R | A | L | G | Y | D | L | P | M | V | D | E | G | Q | P | E | P | E | F | Q | R | I | L | D | I | V | D | P | N | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | R | H | S | D | P | E | . | . | . | . | . | . | . | . | L | L | K | Q | K | L | Q | S | Y | K | . | . | I | S | . | . | . | . | . | . | . | P | G | G | I | S | Q | I | L | D | L | V | K | G | T | H
Template Known Secondary structure |  |  |  |  | S |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | . | . |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 386 | . | . | . | 390 | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | 400 | . | . |  |  | . | . |  |  |  |  |  |  |  | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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