Job Description O01498 Confidence 96.84% Date Fri May 3 21:45:00 BST 2013 Rank 242 Aligned Residues 125 % Identity 10% Template c4fldA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:regulation of nuclear pre-mrna domain-containing protein PDBTitle: cid of human rprd1b Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.				80	.	.
Predicted Secondary structure																																																																												.	.	.
Query SS confidence																																																																												.	.	.
Query Sequence		S	F	P	M	S	A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	.	.	.	E	E	R
Query Conservation																																																																												.	.	.
Alig confidence																		.	.	.	.	.	.																																																					.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		S	F	S	E	S	A	L	E	K	K	L	S	E	L	S	N	.	.	.	.	.	.	S	Q	Q	S	V	Q	T	L	S	L	W	L	I	H	H	R	K	H	A	G	P	I	V	S	V	W	H	R	E	L	R	K	A	K	S	N	R	K	L	T	F	L	Y	L	A	N	D	V	I	Q	N	S	K	R	K	G	P	E
Template Known Secondary structure														T	S			.	.	.	.	.	.	G	G	G	S											T	G	G	G															S																				T	T	T		S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	K	E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		F	T	R	E	F	.	E	S	V	L	V	D	A	F	S	H	V	A	R	E	A	D	E	G	C	K	K	P	L	E	R	L	L	N	I	W	Q	E	R	S	V	Y	G	G	E	F	I	Q	Q	L	K	L	S	M	E
Template Known Secondary structure							.	T	T	T												S		S																T	T	S	S
Template Predicted Secondary structure							.
Template SS confidence
		77	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D