Job Description O01498 Confidence 96.96% Date Fri May 3 21:45:00 BST 2013 Rank 241 Aligned Residues 127 % Identity 13% Template c4flbA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:regulation of nuclear pre-mrna domain-containing protein 2; PDBTitle: cid of human rprd2 Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	S	F	P	M	S	A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		S	A	G	A	L	E	S	S	L	D	R	K	F	Q	S	V	T	N	.	.	.	.	.	.	T	M	E	S	I	Q	G	L	S	S	W	C	I	E	N	K	K	H	H	S	T	I	V	Y	H	W	M	K	W	L	R	R	S	A	Y	P	H	R	L	N	L	F	Y	L	A	N	D	V	I	Q	N	C	K	R	K	N
Template Known Secondary structure																			S	.	.	.	.	.	.	S														T	G	G	G															S																			T	T	T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	K	E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	T	S	.	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K
Query Conservation																					.
Alig confidence								.													.
Template Conservation								.
Template Sequence		A	I	I	F	R	E	.	S	F	A	D	V	L	P	E	A	A	A	L	V	K	D	P	S	V	S	K	S	V	E	R	I	F	K	I	W	E	D	R	N	V	Y	P	E	E	M	I	V	A	L	R	E	A	L	S
Template Known Secondary structure			T					.				T	T							T	T		S	T	T	T															T	S	S													T
Template Predicted Secondary structure								.
Template SS confidence
		93	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D