Job Description O01498 Confidence 46.20% Date Fri May 3 21:45:00 BST 2013 Rank 297 Aligned Residues 101 % Identity 16% Template c4a0cB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cullin-associated nedd8-dissociated protein 1; PDBTitle: structure of the cand1-cul4b-rbx1 complex Resolution 3.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.
Query SS confidence																																			.	.	.	.	.
Query Sequence		A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	.	.	.	.	.	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F	R	K
Query Conservation																																			.	.	.	.	.
Alig confidence												.																							.	.	.	.	.
Template Conservation												.
Template Sequence		H	I	S	N	L	L	E	K	M	T	.	S	S	D	K	D	F	R	F	M	A	T	N	D	L	M	T	E	L	Q	K	D	S	I	K	L	D	D	D	S	E	R	K	V	V	K	M	I	L	K	L	L	E	D	K	N	G	E	V	Q	N	L	A	V	K	C	L	G	P	L	V	S	K	V	K	E	Y	Q	V	E
Template Known Secondary structure									T	T	S	.	S	S																	S	S			S				S													T	T	S		S											T							S	S
Template Predicted Secondary structure												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K
Query Conservation
Alig confidence			.	.	.	.	.
Template Conservation			.	.	.	.	.
Template Sequence		T	.	.	.	.	.	I	V	D	T	L	C	T	N	M	L	S	D	K	E	Q	L	R	D	I	S	S	I	G	L	K	T
Template Known Secondary structure			.	.	.	.	.								T	T	T		S	S	T	T
Template Predicted Secondary structure			.	.	.	.	.
Template SS confidence
		86						.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D