Job Description O01498 Confidence 69.24% Date Fri May 3 21:45:00 BST 2013 Rank 280 Aligned Residues 133 % Identity 9% Template c3ibvB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:exportin-t; PDBTitle: karyopherin cytosolic state Resolution 3.10 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		F	P	M	S	A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																				.																											.	.	.
Template Conservation																																																				.
Template Sequence		M	S	A	Q	D	V	E	N	A	V	E	A	A	L	D	P	S	V	G	P	I	I	K	Q	Q	A	T	D	F	I	G	S	L	R	S	S	S	T	G	W	K	I	C	H	E	I	F	S	E	K	.	T	K	Y	K	P	S	T	R	L	I	C	L	Q	T	L	S	E	K	V	R	E	W	N	N	E	S	N	L	L
Template Known Secondary structure																	T	T	S		T	T															S	T	T									T	T			.	S	S	S																					T	T	T	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		R	K	E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	.	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K	N	L	V	A
Query Conservation																			.
Alig confidence																			.																										.
Template Conservation																																													.
Template Sequence		E	L	Q	M	I	R	D	S	V	W	S	Y	I	K	E	L	S	F	L	D	E	P	A	Y	I	S	N	A	V	Q	H	L	L	T	L	L	F	L	Q	L	Y	P	S	.	N	W	N	D	F	F	A	S	L	Q	G	V	I	A	A
Template Known Secondary structure																S	T	T	S	T	T	S																				T	T	T	.	T		T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D