Job Description O01498 Confidence 93.36% Date Fri May 3 21:45:00 BST 2013 Rank 252 Aligned Residues 108 % Identity 15% Template c3gq2B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:general vesicular transport factor p115; PDBTitle: crystal structure of the dimer of the p115 tether globular head domain Resolution 2.18 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F	R	K	E	V	S	S	A	.	Q	F	I	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M
Query Conservation																																																												.
Alig confidence													.	.	.	.																																												.
Template Conservation													.	.	.	.
Template Sequence		S	Q	F	T	E	I	F	I	K	Q	Q	.	.	.	.	E	N	V	T	L	L	L	S	L	L	E	E	F	D	F	H	V	R	W	P	G	V	K	L	L	T	S	L	L	K	Q	L	G	P	Q	V	Q	Q	I	I	L	V	S	P	M	G	V	S	R	L	M	D	L	L	A	D	S	R	E	V	I	R	N	D	G
Template Known Secondary structure										S	S	T	.	.	.	.											T																					S											S	T	T							G	G	G	T		S	S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		112	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		R	L	T	V	Q	K	W	V	.	.	.	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K	N	L	V	A	D	G	Y
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		V	L	L	L	Q	A	L	T	R	S	N	G	A	I	Q	K	I	V	A	F	E	N	A	F	E	R	L	L	D	I	I	T	E	E	G	N
Template Known Secondary structure										T	T											T	T												T	T	G
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D