Job Description O01498 Confidence 26.97% Date Fri May 3 21:45:00 BST 2013 Rank 325 Aligned Residues 116 % Identity 11% Template c3a6pA_ PDB info PDB header:protein transport/nuclear protein/rna Chain: A: PDB Molecule:exportin-5; PDBTitle: crystal structure of exportin-5:rangtp:pre-mirna complex Resolution 2.92 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		M	S	A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	.	.	.	N	C	E	E	R	F	R	K
Query Conservation																																																																							.	.	.
Alig confidence																																																	.	.																					.	.	.
Template Conservation																																																	.	.
Template Sequence		C	E	Q	L	V	K	A	V	T	V	M	M	D	P	N	S	T	Q	R	Y	R	L	E	A	L	K	F	C	E	E	F	K	E	K	C	P	I	C	V	P	C	G	L	R	L	A	E	.	.	K	T	Q	V	A	I	V	R	H	F	G	L	Q	I	L	E	H	V	V	K	F	R	W	N	G	M	S	R	L	E	K
Template Known Secondary structure															T	T																					T	T									T	S	.	.	T	T	S																			S	G	G	G	S
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	.	.	.	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		V	Y	L	K	N	S	V	M	E	L	I	A	N	G	T	L	N	I	L	E	E	E	N	H	I	K	D	A	L	S	R	I	V	V	E	M	I	K	R	E	W	P	Q	H
Template Known Secondary structure															S	S			T	T	S	S																				S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D