Job Description O01498 Confidence 91.35% Date Fri May 3 21:45:00 BST 2013 Rank 256 Aligned Residues 117 % Identity 15% Template c2w3cA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:general vesicular transport factor p115; PDBTitle: globular head region of the human general vesicular2 transport factor p115 Resolution 2.22 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																					.	.																																												.
Query SS confidence																					.	.																																												.
Query Sequence		W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	.	.	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F	R	K	E	V	S	S	A	.	Q	F	I	N	E	L	K	A	L	C	T	S	S	Q	R
Query Conservation																					.	.																																												.
Alig confidence																					.	.																																												.
Template Conservation
Template Sequence		L	D	T	L	Y	N	I	I	S	N	S	Q	F	T	E	I	F	I	K	Q	Q	E	N	V	T	L	L	L	S	L	L	E	E	F	D	F	H	V	R	W	P	G	V	K	L	L	T	S	L	L	K	Q	L	G	P	Q	V	Q	Q	I	I	L	V	S	P	M	G	V	S	R	L	M	D	L	L	A	D	S	R	E
Template Known Secondary structure																					S	T										T	T																					S											S	T	T							G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	.	.	.	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K	N	L	V	A	D	G	Y	S
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		V	I	R	N	D	G	V	L	L	L	Q	A	L	T	R	S	N	G	A	I	Q	K	I	V	A	F	E	N	A	F	E	R	L	L	D	I	I	S	E	E	G	N	S
Template Known Secondary structure																T	T											T	T												T	T	G	G
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D