Job Description O01498 Confidence 97.02% Date Fri May 3 21:45:00 BST 2013 Rank 240 Aligned Residues 65 % Identity 17% Template c2pjwV_ PDB info PDB header:endocytosis/exocytosis Chain: V: PDB Molecule:vacuolar protein sorting-associated protein 27; PDBTitle: the vps27/hse1 complex is a gat domain-based scaffold for2 ubiquitin-dependent sorting Resolution 3.01 Å

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Show / Hide Conservation and Alignment quality

		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	P	T	G	E	R	Q	D	P	E	D	L	A	Q	L	E	A	A	S	Y	A	Q	G	N	L	I	D	A	H	L	A	S	I	D	R	Q	S	N	S	L	A	Q	I	D	V	A	I	R	D	V	L	A	L	Y	D	D	A	I	Q	K	G	G	F	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	P	L	N	E	I	L	E	D	S	K	L	Q	N	L	A	Q	R	V	F	A	S	K	A	R	L	N	Y	A	L	N	D	K	A	Q	K	Y	N	T	L	I	E	X	N	G	K	I	S	E	I	X	N	I	Y	D	R	L	L	E	Q	Q	L	Q	S
Template Known Secondary structure		T		S		S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D