Return to main results Retrieve Phyre Job Id

Job DescriptionO01498
Confidence66.14%DateFri May 3 21:45:00 BST 2013
Rank284Aligned Residues71
% Identity14%Templatec2l1lB_
PDB info PDB header:nuclear proteinChain: B: PDB Molecule:exportin-1; PDBTitle: nmr solution structure of the phi0 pki nes peptide in complex with2 crm1-rangtp
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50.........60.........70.........80... ......90.........100.
Predicted Secondary structure 









..
Query SS confidence 




















































. .

















Query Sequence  GILAFCDMINNDFEGSKTGIKSLRKRLNNRDPHVVLLAISVLDSCWANCEERF. . RKEVSSAQFINELKALCT
Query Conservation        
 
         
   
 


          

 

     


   ..  

    
   
     
Alig confidence 




















































..

















Template Conservation   

 
   
  
   
  

  

  
   
  

  
  

  
   
   

        


  

  
 
Template Sequence  IVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIDEILNNIN
Template Known Secondary structure 

TT

STTTGGGGTS

TT
SS
TT
Template Predicted Secondary structure 











Template SS confidence 








































































   547..550.........560.........570.........580.........590.........600.........610.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D