Job Description O01498 Confidence 96.63% Date Fri May 3 21:45:00 BST 2013 Rank 244 Aligned Residues 125 % Identity 10% Template c2km4A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:regulator of ty1 transposition protein 103; PDBTitle: solution structure of rtt103 ctd interacting domain Resolution UNK

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.																			.	.	.	.
Query SS confidence																																																										.	.																			.	.	.	.
Query Sequence		S	F	P	M	S	A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	.	.	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	.	.	.	.
Query Conservation																																																										.	.																			.	.	.	.
Alig confidence																		.	.	.	.	.	.																																			.	.																			.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		A	F	S	S	E	Q	F	T	T	K	L	N	T	L	E	D	.	.	.	.	.	.	S	Q	E	S	I	S	S	A	S	K	W	L	L	L	Q	Y	R	D	A	P	K	V	A	E	M	W	K	E	Y	M	L	R	P	S	V	N	T	R	R	K	L	L	G	L	Y	L	M	N	H	V	V	Q	Q	A	K	G	Q	K
Template Known Secondary structure														T			S	.	.	.	.	.	.														T		G	G	G													T	S	S	S	S																				G	G	G	T
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	R	F	R	K	E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		I	I	Q	F	Q	D	S	F	G	K	.	V	A	A	E	V	L	G	R	I	N	Q	E	F	P	R	D	L	K	K	K	L	S	R	V	V	N	I	L	K	E	R	N	I	F	S	K	Q	V	V	N	D	I	E	R	S	L	A
Template Known Secondary structure												.	T												S																			T		S
Template Predicted Secondary structure												.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D