Phyre 2 alignment of O01498 with c2eqxA

Job Description O01498
Confidence 35.69% Date Fri May 3 21:45:00 BST 2013

Rank 310 Aligned Residues 71

% Identity 10% Template c2eqxA_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:kelch repeat and btb domain-containing protein 4; PDBTitle: solution structure of the back domain of kelch repeat and2 btb domain-containing protein 4

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence	S	V	L	D	S	C	W	A	N	C	E	E	R	F	R	K	E	V	S	S	A	Q	F	I	.	.	.	.	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K	N	L	V	A	D	G
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.																	.											.	.
Template Conservation																																													.											.	.
Template Sequence	E	L	Y	T	A	A	K	H	C	A	K	T	H	L	A	Q	L	Q	N	T	E	E	F	L	H	L	P	H	R	L	L	T	D	I	I	S	D	G	V	P	C	S	Q	N	.	P	T	E	A	I	E	A	W	I	N	.	.	F	N	K	E	E	R	E	A	F	A	E	S	L	R	T	S	L	K	E	I	G
Template Known Secondary structure													T						T	S						S											T				T	T	S		.											.	.	T	T																			S
Template Predicted Secondary structure																																													.											.	.
Template SS confidence
	177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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