Job Description O01498 Confidence 62.04% Date Fri May 3 21:45:00 BST 2013 Rank 288 Aligned Residues 71 % Identity 15% Template c1wa5B_ PDB info PDB header:nuclear transport Chain: B: PDB Molecule:importin alpha subunit; PDBTitle: crystal structure of the exportin cse1p complexed with its2 cargo (kap60p) and rangtp Resolution 2.0 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.											.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	.	.	.	.	.	.	.	.	.	.	R	F	R	K	E	V	S	S	A	Q	F	I	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	C	I	K	P	L	C	D	L	L	E	I	A	D	N	R	I	I	E	V	T	L	D	A	L	E	N	I	L	K	M	G	E	A	D	K	E	A	R	G	L	N	I	N	E	N	A	D	F	I	E	K	A	G	G	M	E	K	I	F	N	C	Q	Q	N	E	N	D	K	I	Y	E	K	A	Y	K	I	I	E	T
Template Known Secondary structure		T									T	T	T																												T		S	S										T	T							G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
		118
Predicted Secondary structure
Query SS confidence
Query Sequence		W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		508

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D