Job Description O01498 Confidence 34.94% Date Fri May 3 21:45:00 BST 2013 Rank 312 Aligned Residues 123 % Identity 13% Template c1w63A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:adapter-related protein complex 1 gamma 1 PDBTitle: ap1 clathrin adaptor core Resolution 4.0 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	.	.	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F	R	K	E	V	S	S	A	Q
Query Conservation																																		.	.
Alig confidence																																		.	.																																							.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		A	Q	V	A	T	N	T	E	T	S	K	N	V	G	N	A	I	L	Y	E	T	V	L	T	I	M	D	I	K	S	E	S	G	L	R	V	L	A	I	N	I	L	G	R	F	L	L	N	N	D	K	N	I	R	Y	V	A	L	T	S	L	L	K	T	V	Q	T	D	H	N	A	V	.	.	.	.	.	.	Q	R
Template Known Secondary structure							T	S			S	S	T																S																			T		S	S	T	T	T																				.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.							.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	N	E	L	K	A	L	C	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K	N	L	V	A	D	G	Y	S	F
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		H	R	S	T	I	V	D	C	L	K	D	L	D	V	S	I	K	R	R	A	M	E	L	.	.	.	.	S	F	A	L	V	N	G	N	N	I	R	G	M	M	K	E	L	L	Y	F	L	D	S	C	E	P	E	F
Template Known Secondary structure		G							G	G	G	S	S												.	.	.	.							S	S	S	T
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D