Return to main results Retrieve Phyre Job Id

Job DescriptionO01498
Confidence98.15%DateFri May 3 21:45:00 BST 2013
Rank160Aligned Residues51
% Identity33%Templatec1t0jA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:voltage-gated calcium channel subunit beta2a; PDBTitle: crystal structure of a complex between voltage-gated calcium channel2 beta2a subunit and a peptide of the alpha1c subunit
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   223......230....... ..240.........250.........260. ........270...
Predicted Secondary structure 







.......







...











Query SS confidence 














. . . . . . .























. . .











Query Sequence  NVRALYDFEAAESNE. . . . . . . LSFVAGDIITITDESNPHWWTGRI. . . GTQQGLFPSSFV
Query Conservation    


         
.......
    

 
               ...    
  
   
Alig confidence 














.......























...











Template Conservation   






    
 
 
     


  



 
    
  

 

        
 


  
Template Sequence  AVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK
Template Known Secondary structure 
SS
B


GGG

SSTT
B

B
TT
TTSSTT



Template Predicted Secondary structure 



































Template SS confidence 




























































   63......70.........80.........90.........100.........110.........120...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D