Job Description O01498 Confidence 86.49% Date Fri May 3 21:45:00 BST 2013 Rank 259 Aligned Residues 67 % Identity 19% Template c1q0vA_ PDB info PDB header:transport binding Chain: A: PDB Molecule:hydrophilic protein; has cysteine rich putative PDBTitle: solution structure of tandem uims of vps27 Resolution UNK

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		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		D	P	N	Y	V	G	S	A	Q	E	E	E	A	I	A	K	A	I	A	A	S	L	A	D	A	E	K	Q	E	K	A	K	K	S	T	S	T	M	Y	P	S	A	K	A	S	S	P	.	.	A	V	Q	T	N	S	N	I	P	E	K	N	V	R	A	L	Y	D	F	E
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		D	R	D	Y	S	T	P	E	D	E	E	E	L	I	R	K	A	I	E	L	S	L	K	E	S	R	N	S	A	S	S	E	P	I	V	P	V	V	E	S	K	N	E	V	K	R	Q	E	I	E	E	E	E	D	P	D	L	K	A	A	I	Q	E	S	L	R	E	A	E
Template Known Secondary structure			S	S	S				S	S																				S																								S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D