Return to main results Retrieve Phyre Job Id

Job DescriptionO01498
Confidence64.86%DateFri May 3 21:45:00 BST 2013
Rank286Aligned Residues113
% Identity13%Templatec1m5nS_
PDB info PDB header:protein transportChain: S: PDB Molecule:importin beta-1 subunit; PDBTitle: crystal structure of heat repeats (1-11) of importin b2 bound to the non-classical nls(67-94) of pthrp
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40...... ...50.........60.........70.........80..
Predicted Secondary structure 













.........




Query SS confidence 


































. . . . . . . . .



































Query Sequence  YEDLLGKITAPTITVENWEGILAFCDMINNDFEGS. . . . . . . . . KTGIKSLRKRLNNRDPHVVLLAISVLDSCWANCEER
Query Conservation         

       
        
 
       .........  
   
 


          

 

     


  
Alig confidence 


































.........



































Template Conservation                        
    
  
               
   
   
 
    

  
   
          
Template Sequence  IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEA
Template Known Secondary structure  GGGSS
SSTTTSSS
GGGTTTTT
SSS
SGG
Template Predicted Secondary structure 















Template SS confidence 















































































   363......370.........380.........390.........400.........410.........420.........430.........440..
 
   83......90.........100.........110.........120.....
Predicted Secondary structure 




Query SS confidence 










































Query Sequence  FRKEVSSAQFINELKALCTSSQRQVAEKMRLTVQKWVDTECKT
Query Conservation     

    
   
          
          
       
Alig confidence 



















.





















Template Conservation           

  
   
  .   
   
  

  
       
Template Sequence  AINDVYLAPLLQCLIEGLSA. EPRVASNVCWAFSSLAEAAYEA
Template Known Secondary structure  GS
TS.
S
Template Predicted Secondary structure 





.




Template SS confidence 










































   443......450.........460.. .......470.........480....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D