Job Description O01498 Confidence 100.00% Date Fri May 3 21:45:00 BST 2013 Rank 1 Aligned Residues 205 % Identity 18% Template c1dvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction Resolution 2.00 Å Model Dimensions (Å) X:59.679 Y:63.881 Z:38.333

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	M	S	A	Y	E	D	L	L	G	K	I	T	A	P	T	I	T	V	E	N	W	E	G	I	L	A	F	C	D	M	I	N	N	D	F	E	G	S	K	T	G	I	K	S	L	R	K	R	L	N	N	R	D	P	H	V	V	L	L	A	I	S	V	L	D	S	C	W	A	N	C	E	E	R	F	R	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	F	R	S	S	F	C	K	N	L	E	N	A	T	S	H	L	R	L	E	P	D	W	P	S	I	L	L	I	C	D	E	I	N	Q	K	D	V	T	P	K	N	A	F	A	A	I	K	K	K	M	N	S	P	N	P	H	S	S	C	Y	S	L	L	V	L	E	S	I	V	K	N	C	G	A	P	V	H	E	E
Template Known Secondary structure					S												T	T		S	S															T	T	S	S														T		S	S																		S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		87	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		V	S	S	A	Q	F	I	N	E	L	K	A	L	C	.	T	S	S	Q	R	Q	V	A	E	K	M	R	L	T	V	Q	K	W	V	D	T	E	C	K	T	E	Q	S	L	S	L	I	V	T	L	H	K	N	L	V	A	D	G	Y	S	F	V	V	D	D	P	K	S	K	T	K	A	I	D	A	K	F	A	N	D
Query Conservation																.
Alig confidence																.																						.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.																														.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	T	K	E	N	C	E	M	F	S	S	F	L	E	S	T	P	H	E	N	V	R	Q	K	M	L	E	L	V	Q	T	W	A	Y	A	.	F	R	S	S	D	K	Y	Q	A	I	K	D	T	M	T	I	L	K	A	K	G	H	T	F	P	E	L	R	E	.	.	.	.	.	.	.	.	.	.	M	F	T	A
Template Known Secondary structure			S	S															S																			.	T	T	T		S	S														T	T									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.											.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	Y	V	G	S	A	Q	E	E	E	A	I	A	K	A	I	A	A	S	L	A	D	A	E	K	Q	E	K	A	K	K	S	T	S	T	M	Y	P	S	A	K	A	S	S	P	A	V	Q	T	N	S	N	I	P	E	K	N	V
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		D	T	A	P	N	W	A	D	G	R	V	C	H	R	C	R	V	E	F	T	F	.	.	T	N	R	K	H	H	C	R	N	C	G	Q	V	F	C	G	Q	C	T	A	K	Q	C	P	L	P	K	Y	G	I	E	K	E	V	R	V
Template Known Secondary structure		S									S	B		T	T	T			B			S	.	.	S	S						T	T	T						S	T	T	S							G	G	G	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D