Return to main results Retrieve Phyre Job Id

Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank172Aligned Residues272
% Identity16%Templated1csna_
SCOP infoProtein kinase-like (PK-like) Protein kinase-like (PK-like) Protein kinases, catalytic subunit
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.........170.........180.........190....... ..200.........210.
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Query Sequence  LRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQ. HPNVVCFFGVCVEK
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Template Sequence  VVGVHYKVGRRIGEGSFGVIFEG. . TNLLNNQQVAIKFEPRRSDAPQ. . . . . . LRDEYRTYKLLAGCTGIPNVYYFGQEG
Template Known Secondary structure  TTT
SS
..TTTT

TTS

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TT


T
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   7..10.........20......... 30.........40.........50. ........60.........70........
 
   212.......220.........230.........240.........250.........260.........270... ......280.....
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Query Sequence  EPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLM. . . . . . HKNVVKITDFGL
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Template Sequence  LHNVLVIDLL. GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM
Template Known Secondary structure  T

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BTTT


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TT
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   7980........ .90.........100.........110.........120.........130.........140.........150.......
 
   286...290.........300... ......310.........320.........330.........340......... 350.....
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Query Sequence  SKQLSDLAHKYKLKDIQA. . . KLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKL. . . . . . . AEVKQK
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Template Sequence  VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR. GSLPWQGLKAATNKQKYERIGEK
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SB
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S
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TT



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S

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   158.160.........170.........180.........190.........200.........210... ......220.........230......
 
   356...360.........370.........380.........390.........400.........410.....
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Query Sequence  VKNGYRMDAPDRMPAFVRNIMISQCWPQNPEDRGNMNEIRLAMESVLDGKVAASNNRSVY
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Template Sequence  KQSTPLRELCAGFPEEFYKY. MHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW
Template Known Secondary structure  S
TTTS
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TT



TT

S
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   237..240.........250...... ...260.........270.........280.........290.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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