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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank95Aligned Residues265
% Identity31%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   133......140.........150.........160.. .......170.........180.........190.........200.........210.
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Query Sequence  LRHDQIKLGKMLGEGAFGGVYKAAFYCKGE. KRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEK
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Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPD. VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT.
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   121........130.........140.........150.........160... ......170.........180.........190........
 
   212.......220.........230.........240.........250.........260.........270. ........280.........290
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Query Sequence  EPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLS
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Template Sequence  PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . .
Template Known Secondary structure  SS



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   199200.........210.........220.........230.........240.........250.........260.........270....
 
   291........300.........310.........320.........330.........340.........350...... ...360.........
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Query Sequence  DLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKV. KNGYRMDAPDRMP
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Template Sequence  . . . . . . . . . . RALPVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP
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   275....280.........290.........300.........310.........320.........330.........340....
 
   370.........380.........390.........400.........410....
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Query Sequence  AFVRNIMISQCWPQNPEDRGNMNEIRLAMESVLDGKVAASNNRSV
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Template Sequence  QDIYNV. MVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEE
Template Known Secondary structure  .T
SSGGGS

T




S
B

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   358.360... ......370.........380.........390.........400.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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