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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank117Aligned Residues252
% Identity25%Templatec4eqmE_
PDB info PDB header:transferaseChain: E: PDB Molecule:protein kinase; PDBTitle: structural analysis of staphylococcus aureus serine/threonine kinase2 pknb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  HDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPI
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Template Sequence  NERYKIVDKLGGGGMSTVYLA. . EDTILNIKVAIKAIFIP. PREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY
Template Known Secondary structure  TTTT..TTT



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   7..10.........20....... ..30.........40.... .....50.........60.........70.........80...
 
   215....220.........230.........240.........250.........260.........270. ........280.........290...
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Query Sequence  MLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLSDLA
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Template Sequence  YLVMEYIEGPTLSEYIESHG. PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK. . . . . .
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   84.....90.........100... ......110.........120.........130.........140.........150......
 
   294.....300.........310.........320.........330.........340.........350.........360... ......
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Query Sequence  HKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMD. . . . APDRMP
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Template Sequence  . . . . . . . . . . . . TVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV. GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIP
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   172.......180.........190.........200.... .....210.........220.........230........
 
   370.........380........ .390.........400.........410
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Query Sequence  AFVRNIMISQCWPQNPEDR. GNMNEIRLAMESVLDGKVAASN
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Template Sequence  QSLSNV. ILRATEKDKANRYKTIQEMKDDLSSVLHENRANED
Template Known Secondary structure  TT.T
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   239240.... .....250.........260.........270.........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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