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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank50Aligned Residues255
% Identity36%Templatec4ebwA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:focal adhesion kinase 1; PDBTitle: structure of focal adhesion kinase catalytic domain in complex with2 novel allosteric inhibitor
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180.........190.........200......
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Query Sequence  NKQDWELRHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFG
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Template Sequence  STRDYEIQRERIELGRCIGEGQFGDVHQGIY. MSNPALAVAIKTC. . . KNCTSDSVREKFLQEALTMRQFDHPHIVKLIG
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GGGB

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   411........420.........430.........440. ........450.... .....460.........470.........480......
 
   207..210.........220.........230.........240.........250.........260.........270. ........280.....
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Query Sequence  VCVEKEPIMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGL
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Template Sequence  VITENPV. WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL
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TT
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   489490..... ....500.........510.........520.........530.........540.........550.........560.......
 
   286...290.........300.........310.........320.........330.........340.........350.........360.....
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Query Sequence  SKQLSDLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAP
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Template Sequence  KL. . . . . . . . . . . . . . . . . . PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMP
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   583. .....590.........600.........610.........620.........630.........640....
 
   366...370.........380.........390.........400.....
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Query Sequence  DRMPAFVRNIMISQCWPQNPEDRGNMNEIRLAMESVLDGK
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Template Sequence  PNCPPTLYSL. MTKCWAYDPSRRPRFTELKAQLSTILEEE
Template Known Secondary structure  TT

.T
SSTTTS

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   645....650.... .....660.........670.........680...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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