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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank298Aligned Residues248
% Identity23%Templatec3utoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase region from c.elegans (fn31-nl-kin-crd-ig26)
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190.........200.........210.....
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Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEPIM
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Template Sequence  DHYDIHEELGTGAFGVVHRV. . TERATGNNFAAKFV. . . . MTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV
Template Known Secondary structure  GTTT..TTT

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ST

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   154.....160.........170... ......180....... ..190.........200.........210.........220.......
 
   216...220.........230.........240.........250.........260.........270...... ...280.........290..
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Query Sequence  LVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHKN. . . VVKITDFGLSKQLSDL
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Template Sequence  MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK
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BT
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   293......300.........310.........320.........330.........340.........350.........360...... ...
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Query Sequence  AHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPD. . . RMP
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Template Sequence  QSVKVTTGTAE. . . . . FAAPEVAEGKPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGIS
Template Known Secondary structure  S
SSGG.....G

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B
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SGGGTTS
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   308.310........ .320.........330.........340........ .350.........360.........370.........380.
 
   370.........380.........390......
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Query Sequence  AFVRNIMISQCWPQNPEDRGNMNEIRL
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Template Sequence  EDGKDF. IRKLLLADPNTRMTIHQALE
Template Known Secondary structure  .TTS
SSGGGS

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   382..... ..390.........400.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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