Return to main results Retrieve Phyre Job Id

Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank195Aligned Residues234
% Identity29%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190.........200.........210...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  RHDQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQYQHPNVVCFFGVCVEKEP
Query Conservation            

 
 

 
             



 
                 
  

  
 




 
 
       
Alig confidence 





















..




















.....





























Template Conservation    
 
     

 
 

 

 
..    
   



 
       .....     

 

  
 




           
Template Sequence  DSDRYELVKDIGAGNFGVARLM. . RDKQANELVAVKYIERGEKID. . . . . ENVKREIINHRSLRHPNIVRFKEVILTPTH
Template Known Secondary structure 
TTT


SSTT
S
..TTTTSSTTSS.....T


TTB


SS
Template Predicted Secondary structure 






..






.....











Template SS confidence 















































































   17..20.........30........ .40.........50......... 60.........70.........80.........
 
   214.....220.........230.........240.........250.........260.........270..... ....280.........290
Predicted Secondary structure 


































...











Query SS confidence 





























































. . .














Query Sequence  IMLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNFLMHK. . . NVVKITDFGLSKQLS
Query Conservation    

 

   
 
   
                  
   
  

    





  


   ...   

 




    
Alig confidence 





















.






































...









.....
Template Conservation    

 
      
         .            
                     
             
   .....
Template Sequence  LAIVMEYASGGELFERICNAGR. FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGY. . . . .
Template Known Secondary structure 

TT
BSSS.

S
SS




GGG


SSS

B




.....
Template Predicted Secondary structure 















.

























.....
Template SS confidence 















































































   90.........100.........110. ........120.........130.........140.........150.........160...
 
   291........300.........310.........320.........330.........340.........350......... 360.....
Predicted Secondary structure 

































.....





Query SS confidence 




































































. . . . .





Query Sequence  DLAHKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNG. . . . . YRMDAP
Query Conservation                      


          







 
 

 
 
  

           
  
.....     
Alig confidence  ..............

































.



















.....





Template Conservation  ..............                    











  .
  

                          
Template Sequence  . . . . . . . . . . . . . . TPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDY
Template Known Secondary structure  ..............
GGG


SS

.SS
TT

SS
SS
TT




TT
Template Predicted Secondary structure  ..............



















.


















Template SS confidence 















































































   179180.........190.........200.........210.. .......220.........230.........240...
 
   366...370.........380.........390......
Predicted Secondary structure 










Query SS confidence 






























Query Sequence  DRMPAFVRNIMISQCWPQNPEDRGNMNEIRL
Query Conservation        
  


  
   

  


  

  
Alig confidence 









.



















Template Conservation     
    

.
   
  

  


  


 
Template Sequence  VHISPECRHL. ISRIFVADPAKRISIPEIRN
Template Known Secondary structure 



.S
SSGGGS

TT
Template Predicted Secondary structure 



.







Template SS confidence 






























   244.....250... ......260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D