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Job DescriptionQ23554
Confidence100.00%DateFri May 3 21:43:27 BST 2013
Rank246Aligned Residues241
% Identity26%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   136...140.........150.........160.........170.........180.........190...... ...200.........210....
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Query Sequence  DQIKLGKMLGEGAFGGVYKAAFYCKGEKRMVAVKVNKGNEKISTRAMIEDVCKEARIMRQY. QHPNVVCFFGVCVEKEPI
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Template Sequence  DNFEFIRVLGKGSFGKVMLA. . RVKETGDLYAVKVLKKD. VILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL
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   353......360.........370.. .......380......... 390.........400.........410.........420.........
 
   215....220.........230.........240.........250.........260.........270. ........280.........290...
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Query Sequence  MLVMELASQGALDSFLKNEKNNVSLRDKLKYSFDASKGLEYLHQHGCIHRDVAARNF. LMHKNVVKITDFGLSKQLSDLA
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Template Sequence  FFVMEFVNGGDLMFHIQKSRR. FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICGT
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   430.........440.........450 .........460.........470.........480.........490.........500........
 
   294.....300.........310.........320.........330.........340.........350.........360.........370...
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Query Sequence  HKYKLKDIQAKLPIRWLAPEVIVTATYTFKSDVYSFGILLWEIFMDGAIPYPGMKLAEVKQKVKNGYRMDAPDRMPAFVR
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Template Sequence  PD. . . . . . . . . . . . . YIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPFEAENEDDLFEAILN. DEVVYPTWLHEDAT
Template Known Secondary structure  GG.............G


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   518. 520.........530.........540......... 550.........560........ .570.........580..
 
   374.....380.........390 ......
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Query Sequence  NIMISQCWPQNPEDRGN. . . . . . MNEIRL
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Template Sequence  GI. LKSFMTKNPTMRLGSLTQGGEHAILR
Template Known Secondary structure  .T
SSGGGSTTSGGGT
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   583. .....590.........600.........610
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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